I've also found there can be differences in the pump diaphragms, depending on the rebuild kit you get. Some have a slightly larger or smaller metal disc, or different shape "bulge" around the disc, or the length of the center pin can be a little longer/shorter. I don't know if these changes have much influence on the pump's output with Weber's, but other brands of carbs offer different pump diaphragms (with these differences) to tune the pump's output. So there might be some effect. For that matter, compare a newer soft pliable diaphragm vs an older firm rigid one, there's a big difference in how much fuel they pump.
Weber's have so many variables available for tuning that it can be difficult to determine which aspect to address.